Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 MIR4674-201ENST00000582457 87 ntBASIC13.77□□□□□ -0.21
HIST1H1AQ02539 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 LINC00896-202ENST00000609602 2128 ntBASIC13.77□□□□□ -0.21
HIST1H1AQ02539 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 AC018695.7-201ENST00000624587 2492 ntBASIC13.76□□□□□ -0.21
HIST1H1AQ02539 REXO1L9P-201ENST00000604264 2108 ntBASIC13.76□□□□□ -0.21
HIST1H1AQ02539 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 KRT8P50-201ENST00000562022 1438 ntBASIC13.76□□□□□ -0.21
HIST1H1AQ02539 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 CCR12P-201ENST00000446203 998 ntBASIC13.76□□□□□ -0.21
HIST1H1AQ02539 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 AP000525.1-201ENST00000608286 694 ntBASIC13.76□□□□□ -0.21
HIST1H1AQ02539 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 AP006294.2-201ENST00000641667 209 ntBASIC13.76□□□□□ -0.21
HIST1H1AQ02539 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H1AQ02539 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 AL390955.1-201ENST00000428694 934 ntBASIC13.75□□□□□ -0.21
HIST1H1AQ02539 SLC25A1P2-201ENST00000430693 912 ntBASIC13.75□□□□□ -0.21
HIST1H1AQ02539 KRT18P23-201ENST00000435622 1283 ntBASIC13.75□□□□□ -0.21
HIST1H1AQ02539 TSPY17P-201ENST00000450329 467 ntBASIC13.75□□□□□ -0.21
HIST1H1AQ02539 AP003041.3-201ENST00000527151 707 ntBASIC13.75□□□□□ -0.21
HIST1H1AQ02539 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 TMEM191A-211ENST00000637163 1067 ntBASIC13.75□□□□□ -0.21
HIST1H1AQ02539 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms