Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2BQ00403 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2BQ00403 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2BQ00403 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2BQ00403 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2BQ00403 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GTF2BQ00403 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GTF2BQ00403 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2BQ00403 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2BQ00403 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
GTF2BQ00403 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF2BQ00403 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.56■□□□□ 0.72
GTF2BQ00403 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF2BQ00403 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.56■□□□□ 0.72
GTF2BQ00403 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF2BQ00403 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2BQ00403 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2BQ00403 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 AC068880.1-201ENST00000507289 2297 ntBASIC19.56■□□□□ 0.72
GTF2BQ00403 AC010460.3-201ENST00000511359 1579 ntBASIC19.56■□□□□ 0.72
GTF2BQ00403 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF2BQ00403 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2BQ00403 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2BQ00403 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
GTF2BQ00403 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GTF2BQ00403 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF2BQ00403 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF2BQ00403 AC104819.1-201ENST00000504587 486 ntBASIC19.55■□□□□ 0.72
GTF2BQ00403 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF2BQ00403 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.55■□□□□ 0.72
GTF2BQ00403 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 AC012317.2-201ENST00000623305 2251 ntBASIC19.55■□□□□ 0.72
GTF2BQ00403 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GTF2BQ00403 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2BQ00403 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GTF2BQ00403 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2BQ00403 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GTF2BQ00403 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2BQ00403 AC018470.1-201ENST00000624790 3129 ntBASIC19.54■□□□□ 0.72
GTF2BQ00403 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2BQ00403 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2BQ00403 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GTF2BQ00403 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2BQ00403 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
GTF2BQ00403 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
GTF2BQ00403 AC007967.3-201ENST00000434308 558 ntBASIC19.54■□□□□ 0.72
GTF2BQ00403 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.54■□□□□ 0.72
GTF2BQ00403 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.54■□□□□ 0.72
GTF2BQ00403 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.54■□□□□ 0.72
GTF2BQ00403 AC009533.2-201ENST00000543664 586 ntBASIC19.54■□□□□ 0.72
GTF2BQ00403 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2BQ00403 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2BQ00403 BNIP3P18-201ENST00000593976 575 ntBASIC19.54■□□□□ 0.72
GTF2BQ00403 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2BQ00403 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms