Protein–RNA interactions for Protein: P98066

TNFAIP6, Tumor necrosis factor-inducible gene 6 protein, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP6P98066 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 AC104819.1-201ENST00000504587 486 ntBASIC15.24■□□□□ 0.03
TNFAIP6P98066 AC112698.1-201ENST00000510299 916 ntBASIC15.24■□□□□ 0.03
TNFAIP6P98066 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 DUTP2-201ENST00000519164 463 ntBASIC15.24■□□□□ 0.03
TNFAIP6P98066 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 MIR3652-201ENST00000579335 131 ntBASIC15.24■□□□□ 0.03
TNFAIP6P98066 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.24■□□□□ 0.03
TNFAIP6P98066 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFAIP6P98066 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFAIP6P98066 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 AC246785.2-201ENST00000432512 513 ntBASIC15.23■□□□□ 0.03
TNFAIP6P98066 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 AC074051.2-201ENST00000565115 352 ntBASIC15.23■□□□□ 0.03
TNFAIP6P98066 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TNFAIP6P98066 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFAIP6P98066 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 MINOS1P3-201ENST00000457048 203 ntBASIC15.22■□□□□ 0.03
TNFAIP6P98066 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFAIP6P98066 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.22■□□□□ 0.03
TNFAIP6P98066 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms