Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX6-1P78426 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NKX6-1P78426 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.82■□□□□ 0.12
NKX6-1P78426 SLC25A6P4-201ENST00000586535 553 ntBASIC15.82■□□□□ 0.12
NKX6-1P78426 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.82■□□□□ 0.12
NKX6-1P78426 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX6-1P78426 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NKX6-1P78426 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
NKX6-1P78426 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
NKX6-1P78426 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-1P78426 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
NKX6-1P78426 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX6-1P78426 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NKX6-1P78426 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NKX6-1P78426 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NKX6-1P78426 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.81■□□□□ 0.12
NKX6-1P78426 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX6-1P78426 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
NKX6-1P78426 AL121912.1-201ENST00000603683 238 ntBASIC15.81■□□□□ 0.12
NKX6-1P78426 AC138894.3-201ENST00000603787 634 ntBASIC15.81■□□□□ 0.12
NKX6-1P78426 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 AC009102.3-201ENST00000623118 1491 ntBASIC15.81■□□□□ 0.12
NKX6-1P78426 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NKX6-1P78426 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NKX6-1P78426 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-1P78426 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.8■□□□□ 0.12
NKX6-1P78426 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-1P78426 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.8■□□□□ 0.12
NKX6-1P78426 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-1P78426 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.8■□□□□ 0.12
NKX6-1P78426 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 RNF126P1-202ENST00000569893 925 ntBASIC15.8■□□□□ 0.12
NKX6-1P78426 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.8■□□□□ 0.12
NKX6-1P78426 AC090616.6-201ENST00000582640 721 ntBASIC15.8■□□□□ 0.12
NKX6-1P78426 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
NKX6-1P78426 AC120114.3-201ENST00000611923 658 ntBASIC15.8■□□□□ 0.12
NKX6-1P78426 IGHV3-41-201ENST00000613121 348 ntBASIC15.8■□□□□ 0.12
NKX6-1P78426 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.8■□□□□ 0.12
NKX6-1P78426 AC117500.6-201ENST00000624871 588 ntBASIC15.8■□□□□ 0.12
NKX6-1P78426 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-1P78426 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms