Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.01■□□□□ 0.31
GABREP78334 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GABREP78334 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.01■□□□□ 0.31
GABREP78334 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.01■□□□□ 0.31
GABREP78334 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.01■□□□□ 0.31
GABREP78334 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GABREP78334 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
GABREP78334 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GABREP78334 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GABREP78334 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.01■□□□□ 0.31
GABREP78334 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.01■□□□□ 0.31
GABREP78334 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17■□□□□ 0.31
GABREP78334 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17■□□□□ 0.31
GABREP78334 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17■□□□□ 0.31
GABREP78334 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
GABREP78334 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 LBH-203ENST00000404397 543 ntTSL 4 BASIC17■□□□□ 0.31
GABREP78334 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
GABREP78334 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17■□□□□ 0.31
GABREP78334 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17■□□□□ 0.31
GABREP78334 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17■□□□□ 0.31
GABREP78334 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17■□□□□ 0.31
GABREP78334 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17■□□□□ 0.31
GABREP78334 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17■□□□□ 0.31
GABREP78334 AC064836.3-201ENST00000607928 673 ntBASIC17■□□□□ 0.31
GABREP78334 AC005593.1-201ENST00000624894 515 ntBASIC17■□□□□ 0.31
GABREP78334 AP000867.4-201ENST00000641616 219 ntBASIC17■□□□□ 0.31
GABREP78334 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GABREP78334 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GABREP78334 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 LINC01126-201ENST00000623515 1646 ntBASIC16.99■□□□□ 0.31
GABREP78334 HCG11-201ENST00000411553 5696 ntBASIC16.99■□□□□ 0.31
GABREP78334 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.99■□□□□ 0.31
GABREP78334 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GABREP78334 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.99■□□□□ 0.31
GABREP78334 AL596442.2-201ENST00000610240 980 ntBASIC16.99■□□□□ 0.31
GABREP78334 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.99■□□□□ 0.31
GABREP78334 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.99■□□□□ 0.31
GABREP78334 AL022326.1-202ENST00000641533 845 ntBASIC16.99■□□□□ 0.31
GABREP78334 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.99■□□□□ 0.31
GABREP78334 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.99■□□□□ 0.31
GABREP78334 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms