Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 IGHGP-201ENST00000390555 1178 ntBASIC17.49■□□□□ 0.39
YBX1P67809 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.49■□□□□ 0.39
YBX1P67809 SLC25A6P5-201ENST00000435663 894 ntBASIC17.49■□□□□ 0.39
YBX1P67809 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 AC011498.5-201ENST00000592027 486 ntBASIC17.49■□□□□ 0.39
YBX1P67809 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.49■□□□□ 0.39
YBX1P67809 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.49■□□□□ 0.39
YBX1P67809 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
YBX1P67809 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 IER3-202ENST00000376377 1350 ntBASIC17.49■□□□□ 0.39
YBX1P67809 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
YBX1P67809 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
YBX1P67809 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.48■□□□□ 0.39
YBX1P67809 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
YBX1P67809 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
YBX1P67809 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
YBX1P67809 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.48■□□□□ 0.39
YBX1P67809 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
YBX1P67809 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.48■□□□□ 0.39
YBX1P67809 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.48■□□□□ 0.39
YBX1P67809 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.48■□□□□ 0.39
YBX1P67809 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.48■□□□□ 0.39
YBX1P67809 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.48■□□□□ 0.39
YBX1P67809 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
YBX1P67809 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YBX1P67809 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
YBX1P67809 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.47■□□□□ 0.39
YBX1P67809 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.47■□□□□ 0.39
YBX1P67809 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
YBX1P67809 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.47■□□□□ 0.39
YBX1P67809 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.47■□□□□ 0.39
YBX1P67809 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.47■□□□□ 0.39
YBX1P67809 AL390719.2-201ENST00000606993 987 ntBASIC17.47■□□□□ 0.39
YBX1P67809 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.47■□□□□ 0.39
YBX1P67809 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
YBX1P67809 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
YBX1P67809 AC093010.1-201ENST00000473625 1624 ntBASIC17.47■□□□□ 0.39
YBX1P67809 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YBX1P67809 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.46■□□□□ 0.39
YBX1P67809 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
YBX1P67809 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
YBX1P67809 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms