Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH8P55286 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.14■□□□□ 0.66
CDH8P55286 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH8P55286 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDH8P55286 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH8P55286 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH8P55286 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 KRT17P6-201ENST00000453795 1220 ntBASIC19.14■□□□□ 0.65
CDH8P55286 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.14■□□□□ 0.65
CDH8P55286 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH8P55286 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH8P55286 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.14■□□□□ 0.65
CDH8P55286 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDH8P55286 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDH8P55286 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH8P55286 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH8P55286 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH8P55286 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 IGHV3-47-201ENST00000425060 335 ntBASIC19.13■□□□□ 0.65
CDH8P55286 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH8P55286 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH8P55286 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH8P55286 Z69720.1-201ENST00000601483 472 ntBASIC19.13■□□□□ 0.65
CDH8P55286 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH8P55286 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH8P55286 AC012313.10-201ENST00000623509 926 ntBASIC19.13■□□□□ 0.65
CDH8P55286 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH8P55286 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH8P55286 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH8P55286 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDH8P55286 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH8P55286 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDH8P55286 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH8P55286 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH8P55286 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDH8P55286 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH8P55286 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDH8P55286 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 AC246785.2-201ENST00000432512 513 ntBASIC19.12■□□□□ 0.65
CDH8P55286 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH8P55286 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH8P55286 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH8P55286 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH8P55286 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDH8P55286 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH8P55286 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDH8P55286 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH8P55286 NSUN5P1-202ENST00000421140 1535 ntBASIC19.11■□□□□ 0.65
CDH8P55286 NSUN5P2-203ENST00000457352 1529 ntBASIC19.11■□□□□ 0.65
CDH8P55286 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDH8P55286 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CDH8P55286 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH8P55286 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH8P55286 MIR3652-201ENST00000579335 131 ntBASIC19.11■□□□□ 0.65
CDH8P55286 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH8P55286 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH8P55286 AL133373.2-201ENST00000623187 2828 ntBASIC19.11■□□□□ 0.65
CDH8P55286 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDH8P55286 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH8P55286 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CDH8P55286 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH8P55286 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms