Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 AC114341.1-201ENST00000618070 349 ntBASIC18.32■□□□□ 0.52
CDH4P55283 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDH4P55283 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH4P55283 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH4P55283 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH4P55283 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 AC100803.2-201ENST00000562459 1963 ntBASIC18.31■□□□□ 0.52
CDH4P55283 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDH4P55283 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH4P55283 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH4P55283 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
CDH4P55283 NUS1P2-201ENST00000417358 873 ntBASIC18.31■□□□□ 0.52
CDH4P55283 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH4P55283 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH4P55283 AC011467.2-201ENST00000598425 242 ntBASIC18.31■□□□□ 0.52
CDH4P55283 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH4P55283 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH4P55283 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH4P55283 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDH4P55283 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH4P55283 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH4P55283 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH4P55283 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH4P55283 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH4P55283 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH4P55283 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH4P55283 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH4P55283 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CDH4P55283 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH4P55283 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH4P55283 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH4P55283 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH4P55283 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CDH4P55283 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH4P55283 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH4P55283 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 RCN1P2-201ENST00000398357 915 ntBASIC18.29■□□□□ 0.52
CDH4P55283 AC007967.3-201ENST00000434308 558 ntBASIC18.29■□□□□ 0.52
CDH4P55283 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.29■□□□□ 0.52
CDH4P55283 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.29■□□□□ 0.52
CDH4P55283 AC111152.3-201ENST00000569699 673 ntBASIC18.29■□□□□ 0.52
CDH4P55283 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 MIR5100-201ENST00000579544 119 ntBASIC18.29■□□□□ 0.52
CDH4P55283 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 AL732292.2-201ENST00000609649 430 ntBASIC18.29■□□□□ 0.52
CDH4P55283 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH4P55283 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH4P55283 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH4P55283 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH4P55283 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH4P55283 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms