Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC4P55056 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC4P55056 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC4P55056 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC4P55056 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
APOC4P55056 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC4P55056 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
APOC4P55056 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.13□□□□□ -0.31
APOC4P55056 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 TP73-AS1-210ENST00000637775 1455 ntBASIC13.13□□□□□ -0.31
APOC4P55056 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
APOC4P55056 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 AC091607.1-201ENST00000490318 1060 ntBASIC13.13□□□□□ -0.31
APOC4P55056 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.13□□□□□ -0.31
APOC4P55056 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC4P55056 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.13□□□□□ -0.31
APOC4P55056 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 MIR5100-201ENST00000579544 119 ntBASIC13.13□□□□□ -0.31
APOC4P55056 BNIP3P18-201ENST00000593976 575 ntBASIC13.13□□□□□ -0.31
APOC4P55056 AC116407.2-201ENST00000613639 860 ntBASIC13.13□□□□□ -0.31
APOC4P55056 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
APOC4P55056 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 AC093010.1-201ENST00000473625 1624 ntBASIC13.13□□□□□ -0.31
APOC4P55056 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC4P55056 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC4P55056 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
APOC4P55056 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC4P55056 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC4P55056 UNC93B7-201ENST00000509439 705 ntBASIC13.12□□□□□ -0.31
APOC4P55056 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC4P55056 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.12□□□□□ -0.31
APOC4P55056 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.12□□□□□ -0.31
APOC4P55056 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.12□□□□□ -0.31
APOC4P55056 AC064862.7-201ENST00000604520 867 ntBASIC13.12□□□□□ -0.31
APOC4P55056 AL138831.2-201ENST00000606564 490 ntBASIC13.12□□□□□ -0.31
APOC4P55056 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 WIZP1-201ENST00000531444 2299 ntBASIC13.12□□□□□ -0.31
APOC4P55056 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms