Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS1P54277 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.74■□□□□ 0.75
PMS1P54277 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.74■□□□□ 0.75
PMS1P54277 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.74■□□□□ 0.75
PMS1P54277 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS1P54277 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS1P54277 SIRPAP1-201ENST00000448467 1770 ntBASIC19.74■□□□□ 0.75
PMS1P54277 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS1P54277 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
PMS1P54277 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 AC022898.2-201ENST00000616822 1312 ntBASIC19.74■□□□□ 0.75
PMS1P54277 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PMS1P54277 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.73■□□□□ 0.75
PMS1P54277 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.73■□□□□ 0.75
PMS1P54277 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PMS1P54277 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.73■□□□□ 0.75
PMS1P54277 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 HYMAI.1-201ENST00000620949 238 ntBASIC19.73■□□□□ 0.75
PMS1P54277 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS1P54277 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PMS1P54277 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.73■□□□□ 0.75
PMS1P54277 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PMS1P54277 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 KRT18P65-201ENST00000439811 1286 ntBASIC19.72■□□□□ 0.75
PMS1P54277 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS1P54277 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.72■□□□□ 0.75
PMS1P54277 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS1P54277 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PMS1P54277 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PMS1P54277 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS1P54277 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS1P54277 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 AC133963.1-201ENST00000504166 1679 ntBASIC19.71■□□□□ 0.75
PMS1P54277 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PMS1P54277 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.71■□□□□ 0.75
PMS1P54277 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PMS1P54277 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS1P54277 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS1P54277 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.71■□□□□ 0.75
PMS1P54277 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
PMS1P54277 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
PMS1P54277 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
PMS1P54277 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS1P54277 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS1P54277 AC020916.1-201ENST00000587762 1774 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms