Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.43■□□□□ 0.22
SSR4P51571 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.43■□□□□ 0.22
SSR4P51571 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.43■□□□□ 0.22
SSR4P51571 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.43■□□□□ 0.22
SSR4P51571 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SSR4P51571 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
SSR4P51571 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.43■□□□□ 0.22
SSR4P51571 AC097374.2-201ENST00000618617 1306 ntBASIC16.43■□□□□ 0.22
SSR4P51571 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.43■□□□□ 0.22
SSR4P51571 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSR4P51571 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.42■□□□□ 0.22
SSR4P51571 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 REXO1L9P-201ENST00000604264 2108 ntBASIC16.42■□□□□ 0.22
SSR4P51571 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SSR4P51571 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR4P51571 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSR4P51571 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SSR4P51571 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SSR4P51571 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR4P51571 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
SSR4P51571 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR4P51571 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.42■□□□□ 0.22
SSR4P51571 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR4P51571 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR4P51571 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR4P51571 INTS4P1-201ENST00000438455 1935 ntBASIC16.42■□□□□ 0.22
SSR4P51571 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR4P51571 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSR4P51571 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR4P51571 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SSR4P51571 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.41■□□□□ 0.22
SSR4P51571 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
SSR4P51571 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 KRT8P47-201ENST00000604727 1398 ntBASIC16.41■□□□□ 0.22
SSR4P51571 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.41■□□□□ 0.22
SSR4P51571 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 FAM220CP-201ENST00000395253 831 ntBASIC16.41■□□□□ 0.22
SSR4P51571 AC132008.2-207ENST00000454517 770 ntBASIC16.41■□□□□ 0.22
SSR4P51571 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.41■□□□□ 0.22
SSR4P51571 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.41■□□□□ 0.22
SSR4P51571 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.41■□□□□ 0.22
SSR4P51571 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 AC116407.2-201ENST00000613639 860 ntBASIC16.41■□□□□ 0.22
SSR4P51571 AL031008.1-201ENST00000619963 541 ntBASIC16.41■□□□□ 0.22
SSR4P51571 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SSR4P51571 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SSR4P51571 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR4P51571 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms