Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.11■□□□□ 0.81
CENPFP49454 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.11■□□□□ 0.81
CENPFP49454 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.11■□□□□ 0.81
CENPFP49454 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CENPFP49454 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CENPFP49454 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CENPFP49454 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CENPFP49454 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CENPFP49454 SIRPAP1-201ENST00000448467 1770 ntBASIC20.11■□□□□ 0.81
CENPFP49454 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.11■□□□□ 0.81
CENPFP49454 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 PRYP5-201ENST00000451909 266 ntBASIC20.1■□□□□ 0.81
CENPFP49454 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.1■□□□□ 0.81
CENPFP49454 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.1■□□□□ 0.81
CENPFP49454 AC105339.1-204ENST00000636249 355 ntBASIC20.1■□□□□ 0.81
CENPFP49454 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CENPFP49454 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.1■□□□□ 0.81
CENPFP49454 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.1■□□□□ 0.81
CENPFP49454 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.1■□□□□ 0.81
CENPFP49454 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CENPFP49454 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.1■□□□□ 0.81
CENPFP49454 AC010507.1-201ENST00000633895 436 ntBASIC20.1■□□□□ 0.81
CENPFP49454 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CENPFP49454 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.1■□□□□ 0.81
CENPFP49454 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CENPFP49454 SPDYE21P-201ENST00000413323 827 ntBASIC20.1■□□□□ 0.81
CENPFP49454 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.1■□□□□ 0.81
CENPFP49454 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CENPFP49454 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.1■□□□□ 0.81
CENPFP49454 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CENPFP49454 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.09■□□□□ 0.81
CENPFP49454 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CENPFP49454 AP005018.1-201ENST00000525475 301 ntBASIC20.09■□□□□ 0.81
CENPFP49454 AC100803.2-201ENST00000562459 1963 ntBASIC20.09■□□□□ 0.81
CENPFP49454 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CENPFP49454 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.09■□□□□ 0.81
CENPFP49454 AL589182.2-201ENST00000619332 1049 ntBASIC20.09■□□□□ 0.81
CENPFP49454 AD001527.2-201ENST00000622994 785 ntBASIC20.09■□□□□ 0.81
CENPFP49454 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.09■□□□□ 0.81
CENPFP49454 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CENPFP49454 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.09■□□□□ 0.81
CENPFP49454 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPFP49454 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPFP49454 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CENPFP49454 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPFP49454 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CENPFP49454 AC236430.1-201ENST00000402231 743 ntBASIC20.08■□□□□ 0.81
CENPFP49454 ELK2BP-201ENST00000415014 1224 ntBASIC20.08■□□□□ 0.81
CENPFP49454 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.08■□□□□ 0.81
CENPFP49454 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.08■□□□□ 0.81
CENPFP49454 RHOQP3-201ENST00000437982 621 ntBASIC20.08■□□□□ 0.81
CENPFP49454 MIR4751-201ENST00000578027 74 ntBASIC20.08■□□□□ 0.81
CENPFP49454 AL022326.1-202ENST00000641533 845 ntBASIC20.08■□□□□ 0.81
CENPFP49454 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CENPFP49454 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPFP49454 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.08■□□□□ 0.81
CENPFP49454 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.08■□□□□ 0.81
CENPFP49454 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.08■□□□□ 0.8
CENPFP49454 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CENPFP49454 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
CENPFP49454 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CENPFP49454 AC132938.5-201ENST00000624980 1813 ntBASIC20.08■□□□□ 0.8
CENPFP49454 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CENPFP49454 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.08■□□□□ 0.8
CENPFP49454 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.08■□□□□ 0.8
CENPFP49454 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CENPFP49454 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPFP49454 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
CENPFP49454 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CENPFP49454 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CENPFP49454 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.07■□□□□ 0.8
CENPFP49454 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.07■□□□□ 0.8
CENPFP49454 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.07■□□□□ 0.8
CENPFP49454 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CENPFP49454 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.07■□□□□ 0.8
CENPFP49454 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.07■□□□□ 0.8
CENPFP49454 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.07■□□□□ 0.8
CENPFP49454 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms