Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CENPAP49450 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CENPAP49450 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.29■□□□□ 0.2
CENPAP49450 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.29■□□□□ 0.2
CENPAP49450 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.29■□□□□ 0.2
CENPAP49450 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CENPAP49450 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.29■□□□□ 0.2
CENPAP49450 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.29■□□□□ 0.2
CENPAP49450 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.29■□□□□ 0.2
CENPAP49450 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.29■□□□□ 0.2
CENPAP49450 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
CENPAP49450 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPAP49450 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.29■□□□□ 0.2
CENPAP49450 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CENPAP49450 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.28■□□□□ 0.2
CENPAP49450 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CENPAP49450 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
CENPAP49450 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.28■□□□□ 0.2
CENPAP49450 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPAP49450 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.28■□□□□ 0.2
CENPAP49450 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CENPAP49450 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPAP49450 AC112497.1-201ENST00000624824 639 ntBASIC16.28■□□□□ 0.2
CENPAP49450 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPAP49450 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 PHGDH-209ENST00000641074 1780 ntBASIC16.28■□□□□ 0.2
CENPAP49450 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPAP49450 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CENPAP49450 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CENPAP49450 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CENPAP49450 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CENPAP49450 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 AC007663.1-201ENST00000438948 1240 ntBASIC16.27■□□□□ 0.2
CENPAP49450 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.27■□□□□ 0.2
CENPAP49450 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.27■□□□□ 0.2
CENPAP49450 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.27■□□□□ 0.2
CENPAP49450 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPAP49450 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CENPAP49450 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CENPAP49450 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CENPAP49450 AC134043.2-201ENST00000624206 2238 ntBASIC16.27■□□□□ 0.19
CENPAP49450 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPAP49450 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPAP49450 AL513477.1-201ENST00000602865 2407 ntBASIC16.27■□□□□ 0.19
CENPAP49450 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPAP49450 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPAP49450 AC092338.2-201ENST00000568827 1415 ntBASIC16.27■□□□□ 0.19
CENPAP49450 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CENPAP49450 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms