Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BRCC3P46736 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
BRCC3P46736 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCC3P46736 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.04■□□□□ 0.64
BRCC3P46736 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.04■□□□□ 0.64
BRCC3P46736 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 AC021087.4-201ENST00000563761 564 ntBASIC19.04■□□□□ 0.64
BRCC3P46736 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.04■□□□□ 0.64
BRCC3P46736 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCC3P46736 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.04■□□□□ 0.64
BRCC3P46736 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCC3P46736 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCC3P46736 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.04■□□□□ 0.64
BRCC3P46736 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCC3P46736 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
BRCC3P46736 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 AC100803.2-201ENST00000562459 1963 ntBASIC19.03■□□□□ 0.64
BRCC3P46736 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.03■□□□□ 0.64
BRCC3P46736 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.03■□□□□ 0.64
BRCC3P46736 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.03■□□□□ 0.64
BRCC3P46736 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCC3P46736 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
BRCC3P46736 MIR7706-201ENST00000613747 67 ntBASIC19.03■□□□□ 0.64
BRCC3P46736 BX640515.1-201ENST00000617215 977 ntBASIC19.03■□□□□ 0.64
BRCC3P46736 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BRCC3P46736 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
BRCC3P46736 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BRCC3P46736 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 REXO1L9P-201ENST00000604264 2108 ntBASIC19.03■□□□□ 0.64
BRCC3P46736 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRCC3P46736 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 IL9RP2-201ENST00000423948 1312 ntBASIC19.02■□□□□ 0.64
BRCC3P46736 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.02■□□□□ 0.64
BRCC3P46736 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
BRCC3P46736 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.02■□□□□ 0.64
BRCC3P46736 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BRCC3P46736 SCARNA2-201ENST00000458748 420 ntBASIC19.02■□□□□ 0.64
BRCC3P46736 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.02■□□□□ 0.64
BRCC3P46736 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.02■□□□□ 0.64
BRCC3P46736 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.02■□□□□ 0.64
BRCC3P46736 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.02■□□□□ 0.64
BRCC3P46736 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.02■□□□□ 0.64
BRCC3P46736 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BRCC3P46736 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRCC3P46736 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.02■□□□□ 0.64
BRCC3P46736 AC243591.1-201ENST00000452967 1364 ntBASIC19.02■□□□□ 0.64
BRCC3P46736 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BRCC3P46736 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BRCC3P46736 AC020763.4-201ENST00000623414 4170 ntBASIC19.02■□□□□ 0.63
BRCC3P46736 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
BRCC3P46736 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BRCC3P46736 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BRCC3P46736 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BRCC3P46736 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.01■□□□□ 0.63
BRCC3P46736 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.01■□□□□ 0.63
BRCC3P46736 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.01■□□□□ 0.63
BRCC3P46736 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.01■□□□□ 0.63
BRCC3P46736 FAM215A-202ENST00000632077 792 ntBASIC19.01■□□□□ 0.63
BRCC3P46736 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BRCC3P46736 AP000867.4-201ENST00000641616 219 ntBASIC19.01■□□□□ 0.63
BRCC3P46736 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.01■□□□□ 0.63
BRCC3P46736 AL356309.3-201ENST00000624132 1934 ntBASIC19.01■□□□□ 0.63
BRCC3P46736 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 AC090164.3-201ENST00000610780 2143 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms