Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.06■□□□□ 0.48
CCNFP41002 AC005521.1-201ENST00000393351 872 ntBASIC18.06■□□□□ 0.48
CCNFP41002 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.06■□□□□ 0.48
CCNFP41002 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.06■□□□□ 0.48
CCNFP41002 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNFP41002 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNFP41002 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCNFP41002 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 AC073508.3-201ENST00000619697 1419 ntBASIC18.06■□□□□ 0.48
CCNFP41002 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 AC090340.1-201ENST00000620778 4980 ntBASIC18.05■□□□□ 0.48
CCNFP41002 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNFP41002 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNFP41002 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCNFP41002 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.05■□□□□ 0.48
CCNFP41002 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCNFP41002 AC104390.1-201ENST00000555663 520 ntBASIC18.05■□□□□ 0.48
CCNFP41002 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.05■□□□□ 0.48
CCNFP41002 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNFP41002 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNFP41002 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCNFP41002 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNFP41002 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 AL355312.1-201ENST00000407115 2176 ntBASIC18.04■□□□□ 0.48
CCNFP41002 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNFP41002 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNFP41002 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 LINC00602-201ENST00000629776 2065 ntBASIC18.04■□□□□ 0.48
CCNFP41002 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCNFP41002 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNFP41002 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.04■□□□□ 0.48
CCNFP41002 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNFP41002 COX11P1-201ENST00000489116 835 ntBASIC18.04■□□□□ 0.48
CCNFP41002 DUTP2-201ENST00000519164 463 ntBASIC18.04■□□□□ 0.48
CCNFP41002 AC140113.3-201ENST00000605663 199 ntBASIC18.04■□□□□ 0.48
CCNFP41002 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNFP41002 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNFP41002 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNFP41002 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNFP41002 AL138688.1-201ENST00000624851 1594 ntBASIC18.04■□□□□ 0.48
CCNFP41002 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms