Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT9P35527 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT9P35527 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT9P35527 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT9P35527 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT9P35527 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT9P35527 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT9P35527 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
KRT9P35527 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.63■□□□□ 0.73
KRT9P35527 AC009065.1-201ENST00000564055 1225 ntBASIC19.63■□□□□ 0.73
KRT9P35527 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.63■□□□□ 0.73
KRT9P35527 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
KRT9P35527 AC073912.3-201ENST00000624414 853 ntBASIC19.63■□□□□ 0.73
KRT9P35527 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT9P35527 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
KRT9P35527 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT9P35527 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
KRT9P35527 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT9P35527 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 AL023806.1-201ENST00000603994 1649 ntBASIC19.62■□□□□ 0.73
KRT9P35527 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 AC009947.2-201ENST00000444014 672 ntBASIC19.62■□□□□ 0.73
KRT9P35527 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.62■□□□□ 0.73
KRT9P35527 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 AC104390.1-201ENST00000555663 520 ntBASIC19.62■□□□□ 0.73
KRT9P35527 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT9P35527 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT9P35527 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT9P35527 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT9P35527 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KRT9P35527 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KRT9P35527 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KRT9P35527 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
KRT9P35527 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT9P35527 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT9P35527 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT9P35527 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT9P35527 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT9P35527 AC133561.5-201ENST00000635547 218 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms