Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC100803.2-201ENST00000562459 1963 ntBASIC18.93■□□□□ 0.62
RFC1P35251 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RFC1P35251 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 LINC01311-201ENST00000565162 1445 ntBASIC18.93■□□□□ 0.62
RFC1P35251 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFC1P35251 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC1P35251 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC1P35251 SPDYE13P-201ENST00000445314 798 ntBASIC18.93■□□□□ 0.62
RFC1P35251 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC1P35251 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC1P35251 VENTXP5-201ENST00000523979 775 ntBASIC18.93■□□□□ 0.62
RFC1P35251 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC1P35251 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC1P35251 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC1P35251 AC004263.2-201ENST00000617183 678 ntBASIC18.93■□□□□ 0.62
RFC1P35251 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC1P35251 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC1P35251 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC1P35251 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RFC1P35251 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC1P35251 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC1P35251 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RFC1P35251 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RFC1P35251 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RFC1P35251 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.92■□□□□ 0.62
RFC1P35251 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFC1P35251 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.92■□□□□ 0.62
RFC1P35251 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.92■□□□□ 0.62
RFC1P35251 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC1P35251 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFC1P35251 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC1P35251 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.92■□□□□ 0.62
RFC1P35251 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC1P35251 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
RFC1P35251 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.91■□□□□ 0.62
RFC1P35251 ZNF444P1-201ENST00000559497 298 ntBASIC18.91■□□□□ 0.62
RFC1P35251 AC083849.1-201ENST00000615227 514 ntBASIC18.91■□□□□ 0.62
RFC1P35251 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.91■□□□□ 0.62
RFC1P35251 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RFC1P35251 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC1P35251 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RFC1P35251 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC1P35251 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RFC1P35251 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC1P35251 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RFC1P35251 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms