Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.14■□□□□ 0.01
COL8A2P25067 AC112698.1-201ENST00000510299 916 ntBASIC15.14■□□□□ 0.01
COL8A2P25067 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.14■□□□□ 0.01
COL8A2P25067 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.14■□□□□ 0.01
COL8A2P25067 AC104692.2-201ENST00000603054 253 ntBASIC15.14■□□□□ 0.01
COL8A2P25067 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.14■□□□□ 0.01
COL8A2P25067 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.14■□□□□ 0.01
COL8A2P25067 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COL8A2P25067 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.14■□□□□ 0.01
COL8A2P25067 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.14■□□□□ 0.01
COL8A2P25067 TP73-AS1-210ENST00000637775 1455 ntBASIC15.14■□□□□ 0.01
COL8A2P25067 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL8A2P25067 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 AKR1C7P-201ENST00000305623 895 ntBASIC15.13■□□□□ 0.01
COL8A2P25067 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 FDX1P1-201ENST00000449115 551 ntBASIC15.13■□□□□ 0.01
COL8A2P25067 KRT8P10-201ENST00000450021 1447 ntBASIC15.13■□□□□ 0.01
COL8A2P25067 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.13■□□□□ 0.01
COL8A2P25067 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.13■□□□□ 0.01
COL8A2P25067 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COL8A2P25067 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.13■□□□□ 0.01
COL8A2P25067 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COL8A2P25067 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL8A2P25067 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
COL8A2P25067 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.12■□□□□ 0.01
COL8A2P25067 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 AC132008.2-207ENST00000454517 770 ntBASIC15.12■□□□□ 0.01
COL8A2P25067 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 AC009078.2-202ENST00000463353 338 ntBASIC15.12■□□□□ 0.01
COL8A2P25067 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.12■□□□□ 0.01
COL8A2P25067 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 AF238378.1-201ENST00000526806 358 ntBASIC15.12■□□□□ 0.01
COL8A2P25067 AC009533.2-201ENST00000543664 586 ntBASIC15.12■□□□□ 0.01
COL8A2P25067 AL160237.2-201ENST00000556165 472 ntBASIC15.12■□□□□ 0.01
COL8A2P25067 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms