Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B4P23634 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ATP2B4P23634 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
ATP2B4P23634 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ATP2B4P23634 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.64■■□□□ 1.06
ATP2B4P23634 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B4P23634 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B4P23634 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ATP2B4P23634 AC002347.1-201ENST00000569543 541 ntBASIC21.64■■□□□ 1.05
ATP2B4P23634 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.64■■□□□ 1.05
ATP2B4P23634 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B4P23634 AC064836.3-201ENST00000607928 673 ntBASIC21.64■■□□□ 1.05
ATP2B4P23634 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B4P23634 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B4P23634 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B4P23634 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B4P23634 AC132938.5-201ENST00000624980 1813 ntBASIC21.64■■□□□ 1.05
ATP2B4P23634 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B4P23634 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B4P23634 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
ATP2B4P23634 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2B4P23634 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2B4P23634 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP2B4P23634 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2B4P23634 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2B4P23634 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B4P23634 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
ATP2B4P23634 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2B4P23634 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ATP2B4P23634 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
ATP2B4P23634 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
ATP2B4P23634 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2B4P23634 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ATP2B4P23634 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2B4P23634 AC023274.1-201ENST00000418278 595 ntBASIC21.62■■□□□ 1.05
ATP2B4P23634 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2B4P23634 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2B4P23634 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP2B4P23634 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2B4P23634 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ATP2B4P23634 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.61■■□□□ 1.05
ATP2B4P23634 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 AL096828.2-201ENST00000567259 1965 ntBASIC21.61■■□□□ 1.05
ATP2B4P23634 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP2B4P23634 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP2B4P23634 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP2B4P23634 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
ATP2B4P23634 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP2B4P23634 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATP2B4P23634 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP2B4P23634 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ATP2B4P23634 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP2B4P23634 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ATP2B4P23634 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms