Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 SEC1P-202ENST00000473944 940 ntBASIC16.68■□□□□ 0.26
TNFRSF1BP20333 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 AC008550.1-201ENST00000511500 884 ntBASIC16.68■□□□□ 0.26
TNFRSF1BP20333 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 AD000864.1-201ENST00000624076 2295 ntBASIC16.68■□□□□ 0.26
TNFRSF1BP20333 CROCCP2-202ENST00000412962 2773 ntBASIC16.68■□□□□ 0.26
TNFRSF1BP20333 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF1BP20333 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 AL355075.4-201ENST00000554988 638 ntBASIC16.67■□□□□ 0.26
TNFRSF1BP20333 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TNFRSF1BP20333 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 LINC00602-201ENST00000629776 2065 ntBASIC16.66■□□□□ 0.26
TNFRSF1BP20333 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.66■□□□□ 0.26
TNFRSF1BP20333 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 DUTP2-201ENST00000519164 463 ntBASIC16.66■□□□□ 0.26
TNFRSF1BP20333 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 MIR3180-4-201ENST00000582223 153 ntBASIC16.66■□□□□ 0.26
TNFRSF1BP20333 MIR4785-201ENST00000585005 73 ntBASIC16.66■□□□□ 0.26
TNFRSF1BP20333 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF1BP20333 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms