Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM21P19474 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM21P19474 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM21P19474 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM21P19474 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM21P19474 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM21P19474 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM21P19474 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM21P19474 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM21P19474 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM21P19474 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM21P19474 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM21P19474 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 AC093010.1-201ENST00000473625 1624 ntBASIC19.81■□□□□ 0.76
TRIM21P19474 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM21P19474 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM21P19474 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM21P19474 RNF152P1-201ENST00000397754 604 ntBASIC19.81■□□□□ 0.76
TRIM21P19474 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM21P19474 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM21P19474 HOMER2P1-201ENST00000455653 964 ntBASIC19.81■□□□□ 0.76
TRIM21P19474 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM21P19474 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TRIM21P19474 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM21P19474 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM21P19474 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM21P19474 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM21P19474 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM21P19474 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM21P19474 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM21P19474 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM21P19474 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM21P19474 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM21P19474 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM21P19474 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM21P19474 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
TRIM21P19474 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM21P19474 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM21P19474 YBX1P2-201ENST00000489612 999 ntBASIC19.79■□□□□ 0.76
TRIM21P19474 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM21P19474 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM21P19474 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM21P19474 MIR3180-4-201ENST00000582223 153 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms