Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.63■□□□□ 0.57
H2AFXP16104 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.63■□□□□ 0.57
H2AFXP16104 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.63■□□□□ 0.57
H2AFXP16104 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
H2AFXP16104 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.63■□□□□ 0.57
H2AFXP16104 AC008406.3-201ENST00000620001 1374 ntBASIC18.63■□□□□ 0.57
H2AFXP16104 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
H2AFXP16104 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.63■□□□□ 0.57
H2AFXP16104 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
H2AFXP16104 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
H2AFXP16104 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.62■□□□□ 0.57
H2AFXP16104 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
H2AFXP16104 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.62■□□□□ 0.57
H2AFXP16104 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.62■□□□□ 0.57
H2AFXP16104 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
H2AFXP16104 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.62■□□□□ 0.57
H2AFXP16104 AC016396.2-201ENST00000562575 1417 ntBASIC18.62■□□□□ 0.57
H2AFXP16104 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 AC046185.3-201ENST00000623228 1824 ntBASIC18.62■□□□□ 0.57
H2AFXP16104 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
H2AFXP16104 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2AFXP16104 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
H2AFXP16104 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.62■□□□□ 0.57
H2AFXP16104 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.62■□□□□ 0.57
H2AFXP16104 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2AFXP16104 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2AFXP16104 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.61■□□□□ 0.57
H2AFXP16104 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.61■□□□□ 0.57
H2AFXP16104 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.61■□□□□ 0.57
H2AFXP16104 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
H2AFXP16104 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.61■□□□□ 0.57
H2AFXP16104 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.61■□□□□ 0.57
H2AFXP16104 NTF6G-201ENST00000591094 616 ntBASIC18.61■□□□□ 0.57
H2AFXP16104 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
H2AFXP16104 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H2AFXP16104 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2AFXP16104 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
H2AFXP16104 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.6■□□□□ 0.57
H2AFXP16104 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 AC034236.2-201ENST00000606662 1610 ntBASIC18.6■□□□□ 0.57
H2AFXP16104 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
H2AFXP16104 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
H2AFXP16104 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
H2AFXP16104 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.6■□□□□ 0.57
H2AFXP16104 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
H2AFXP16104 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.6■□□□□ 0.57
H2AFXP16104 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.6■□□□□ 0.57
H2AFXP16104 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H2AFXP16104 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.6■□□□□ 0.57
H2AFXP16104 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.6■□□□□ 0.57
H2AFXP16104 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms