Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD8P13378 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD8P13378 AC148477.5-201ENST00000625164 1645 ntBASIC19.68■□□□□ 0.74
HOXD8P13378 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXD8P13378 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD8P13378 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD8P13378 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD8P13378 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD8P13378 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXD8P13378 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.67■□□□□ 0.74
HOXD8P13378 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 AC003669.1-201ENST00000334569 611 ntBASIC19.67■□□□□ 0.74
HOXD8P13378 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD8P13378 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXD8P13378 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXD8P13378 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 AC135776.1-201ENST00000319817 2481 ntBASIC19.67■□□□□ 0.74
HOXD8P13378 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD8P13378 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD8P13378 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXD8P13378 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 AC100803.2-201ENST00000562459 1963 ntBASIC19.66■□□□□ 0.74
HOXD8P13378 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD8P13378 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
HOXD8P13378 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXD8P13378 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD8P13378 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.66■□□□□ 0.74
HOXD8P13378 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXD8P13378 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD8P13378 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD8P13378 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD8P13378 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD8P13378 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
HOXD8P13378 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD8P13378 MIR1199-201ENST00000621445 119 ntBASIC19.66■□□□□ 0.74
HOXD8P13378 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD8P13378 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD8P13378 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXD8P13378 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD8P13378 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD8P13378 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD8P13378 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 AC018445.3-201ENST00000624177 1945 ntBASIC19.65■□□□□ 0.74
HOXD8P13378 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD8P13378 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.65■□□□□ 0.74
HOXD8P13378 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD8P13378 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD8P13378 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD8P13378 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 AC040169.1-201ENST00000565382 521 ntBASIC19.65■□□□□ 0.74
HOXD8P13378 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXD8P13378 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD8P13378 AC005593.1-201ENST00000624894 515 ntBASIC19.65■□□□□ 0.74
HOXD8P13378 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD8P13378 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXD8P13378 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms