Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD28P10747 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 ANO7L1-203ENST00000602586 1720 ntBASIC14.03□□□□□ -0.16
CD28P10747 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.03□□□□□ -0.16
CD28P10747 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CD28P10747 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD28P10747 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CD28P10747 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CD28P10747 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CD28P10747 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CD28P10747 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.02□□□□□ -0.16
CD28P10747 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CD28P10747 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD28P10747 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.02□□□□□ -0.17
CD28P10747 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.02□□□□□ -0.17
CD28P10747 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.02□□□□□ -0.17
CD28P10747 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.02□□□□□ -0.17
CD28P10747 AF186996.4-201ENST00000467186 377 ntBASIC14.02□□□□□ -0.17
CD28P10747 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.02□□□□□ -0.17
CD28P10747 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 AC009533.2-201ENST00000543664 586 ntBASIC14.02□□□□□ -0.17
CD28P10747 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.02□□□□□ -0.17
CD28P10747 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.02□□□□□ -0.17
CD28P10747 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.02□□□□□ -0.17
CD28P10747 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.02□□□□□ -0.17
CD28P10747 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD28P10747 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.02□□□□□ -0.17
CD28P10747 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 KRT18P67-201ENST00000432816 1264 ntBASIC14.01□□□□□ -0.17
CD28P10747 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.01□□□□□ -0.17
CD28P10747 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.01□□□□□ -0.17
CD28P10747 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.01□□□□□ -0.17
CD28P10747 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.01□□□□□ -0.17
CD28P10747 MTDHP3-201ENST00000594186 672 ntBASIC14.01□□□□□ -0.17
CD28P10747 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.01□□□□□ -0.17
CD28P10747 BX640515.1-201ENST00000617215 977 ntBASIC14.01□□□□□ -0.17
CD28P10747 AC148477.8-201ENST00000624298 468 ntBASIC14.01□□□□□ -0.17
CD28P10747 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms