Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.84■□□□□ 0.61
RARAP10276 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.84■□□□□ 0.61
RARAP10276 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.84■□□□□ 0.61
RARAP10276 PCDHA12-202ENST00000613593 2588 ntBASIC18.84■□□□□ 0.61
RARAP10276 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARAP10276 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
RARAP10276 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 LINC00167-201ENST00000530583 1419 ntBASIC18.83■□□□□ 0.61
RARAP10276 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.83■□□□□ 0.61
RARAP10276 AC080080.1-201ENST00000625121 2420 ntBASIC18.83■□□□□ 0.61
RARAP10276 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RARAP10276 TNRC18P3-201ENST00000441896 2691 ntBASIC18.83■□□□□ 0.61
RARAP10276 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RARAP10276 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.83■□□□□ 0.6
RARAP10276 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RARAP10276 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.83■□□□□ 0.6
RARAP10276 STARP1-201ENST00000397973 869 ntBASIC18.83■□□□□ 0.6
RARAP10276 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.83■□□□□ 0.6
RARAP10276 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.83■□□□□ 0.6
RARAP10276 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 DUTP2-201ENST00000519164 463 ntBASIC18.83■□□□□ 0.6
RARAP10276 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.83■□□□□ 0.6
RARAP10276 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.83■□□□□ 0.6
RARAP10276 AC008687.5-201ENST00000593746 558 ntBASIC18.83■□□□□ 0.6
RARAP10276 AL136038.4-201ENST00000603606 1261 ntBASIC18.83■□□□□ 0.6
RARAP10276 AC006011.2-201ENST00000621313 1158 ntBASIC18.83■□□□□ 0.6
RARAP10276 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.83■□□□□ 0.6
RARAP10276 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RARAP10276 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.83■□□□□ 0.6
RARAP10276 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.83■□□□□ 0.6
RARAP10276 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RARAP10276 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RARAP10276 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RARAP10276 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.83■□□□□ 0.6
RARAP10276 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.82■□□□□ 0.6
RARAP10276 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.82■□□□□ 0.6
RARAP10276 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.82■□□□□ 0.6
RARAP10276 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.82■□□□□ 0.6
RARAP10276 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RARAP10276 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.82■□□□□ 0.6
RARAP10276 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.82■□□□□ 0.6
RARAP10276 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.82■□□□□ 0.6
RARAP10276 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RARAP10276 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RARAP10276 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RARAP10276 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.82■□□□□ 0.6
RARAP10276 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARAP10276 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RARAP10276 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 LINC00602-201ENST00000629776 2065 ntBASIC18.81■□□□□ 0.6
RARAP10276 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RARAP10276 AC124067.4-201ENST00000519691 2379 ntBASIC18.81■□□□□ 0.6
RARAP10276 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RARAP10276 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 TSPY5P-201ENST00000426936 936 ntBASIC18.81■□□□□ 0.6
RARAP10276 AC092597.1-201ENST00000487352 616 ntBASIC18.81■□□□□ 0.6
RARAP10276 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.81■□□□□ 0.6
RARAP10276 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
RARAP10276 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.81■□□□□ 0.6
RARAP10276 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.81■□□□□ 0.6
RARAP10276 AC024563.2-201ENST00000603282 481 ntBASIC18.81■□□□□ 0.6
RARAP10276 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.81■□□□□ 0.6
RARAP10276 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
RARAP10276 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RARAP10276 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RARAP10276 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms