Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC018445.3-201ENST00000624177 1945 ntBASIC20.18■□□□□ 0.82
HOXC6P09630 AC098818.2-201ENST00000564925 2320 ntBASIC20.18■□□□□ 0.82
HOXC6P09630 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXC6P09630 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXC6P09630 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXC6P09630 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXC6P09630 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXC6P09630 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HOXC6P09630 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.18■□□□□ 0.82
HOXC6P09630 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HOXC6P09630 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.18■□□□□ 0.82
HOXC6P09630 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HOXC6P09630 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HOXC6P09630 AC005082.1-201ENST00000413042 2259 ntBASIC20.17■□□□□ 0.82
HOXC6P09630 BX323043.1-201ENST00000641006 1765 ntBASIC20.17■□□□□ 0.82
HOXC6P09630 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXC6P09630 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXC6P09630 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.17■□□□□ 0.82
HOXC6P09630 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXC6P09630 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXC6P09630 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HOXC6P09630 AC004706.3-202ENST00000621574 984 ntBASIC20.17■□□□□ 0.82
HOXC6P09630 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 CROCCP3-202ENST00000420820 1947 ntBASIC20.17■□□□□ 0.82
HOXC6P09630 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HOXC6P09630 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HOXC6P09630 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC6P09630 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXC6P09630 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC6P09630 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC6P09630 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 COX5BP2-201ENST00000392354 334 ntBASIC20.16■□□□□ 0.82
HOXC6P09630 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.16■□□□□ 0.82
HOXC6P09630 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.16■□□□□ 0.82
HOXC6P09630 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXC6P09630 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXC6P09630 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC6P09630 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXC6P09630 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC6P09630 LINC02084-201ENST00000606069 1096 ntBASIC20.16■□□□□ 0.82
HOXC6P09630 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC6P09630 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXC6P09630 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXC6P09630 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC6P09630 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC6P09630 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
HOXC6P09630 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.15■□□□□ 0.82
HOXC6P09630 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC6P09630 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC6P09630 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC6P09630 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC6P09630 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HOXC6P09630 AC005829.1-201ENST00000570002 483 ntBASIC20.15■□□□□ 0.82
HOXC6P09630 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC6P09630 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 AC022898.2-201ENST00000616822 1312 ntBASIC20.15■□□□□ 0.82
HOXC6P09630 KRT8P47-201ENST00000604727 1398 ntBASIC20.15■□□□□ 0.82
HOXC6P09630 AC002310.6-201ENST00000624451 1377 ntBASIC20.15■□□□□ 0.82
HOXC6P09630 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.15■□□□□ 0.82
HOXC6P09630 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC6P09630 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HOXC6P09630 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HOXC6P09630 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC6P09630 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HOXC6P09630 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HOXC6P09630 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HOXC6P09630 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HOXC6P09630 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 ANO7L1-203ENST00000602586 1720 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms