Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM1P09493 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.79■□□□□ 0.76
TPM1P09493 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM1P09493 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
TPM1P09493 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM1P09493 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM1P09493 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM1P09493 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TPM1P09493 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.79■□□□□ 0.76
TPM1P09493 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.79■□□□□ 0.76
TPM1P09493 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.79■□□□□ 0.76
TPM1P09493 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM1P09493 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 AL135905.2-201ENST00000584934 1404 ntBASIC19.78■□□□□ 0.76
TPM1P09493 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM1P09493 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM1P09493 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM1P09493 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TPM1P09493 FAM197Y1-201ENST00000421178 764 ntBASIC19.78■□□□□ 0.76
TPM1P09493 KRT18P23-201ENST00000435622 1283 ntBASIC19.78■□□□□ 0.76
TPM1P09493 AC128676.1-201ENST00000454392 318 ntBASIC19.78■□□□□ 0.76
TPM1P09493 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.78■□□□□ 0.76
TPM1P09493 RPPH1-201ENST00000516869 333 ntBASIC19.78■□□□□ 0.76
TPM1P09493 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.78■□□□□ 0.76
TPM1P09493 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.78■□□□□ 0.76
TPM1P09493 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.78■□□□□ 0.76
TPM1P09493 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
TPM1P09493 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TPM1P09493 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TPM1P09493 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TPM1P09493 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM1P09493 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
TPM1P09493 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TPM1P09493 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TPM1P09493 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TPM1P09493 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TPM1P09493 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TPM1P09493 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.77■□□□□ 0.76
TPM1P09493 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.77■□□□□ 0.76
TPM1P09493 FAM197Y4-202ENST00000622692 608 ntBASIC19.77■□□□□ 0.76
TPM1P09493 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TPM1P09493 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.77■□□□□ 0.76
TPM1P09493 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TPM1P09493 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TPM1P09493 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TPM1P09493 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TPM1P09493 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TPM1P09493 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TPM1P09493 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TPM1P09493 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TPM1P09493 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TPM1P09493 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.76■□□□□ 0.75
TPM1P09493 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 AC097488.1-201ENST00000507834 756 ntBASIC19.76■□□□□ 0.75
TPM1P09493 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TPM1P09493 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.76■□□□□ 0.75
TPM1P09493 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.76■□□□□ 0.75
TPM1P09493 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms