Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.9■□□□□ 0.62
RB1P06400 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.9■□□□□ 0.62
RB1P06400 MIR4751-201ENST00000578027 74 ntBASIC18.9■□□□□ 0.62
RB1P06400 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.9■□□□□ 0.62
RB1P06400 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
RB1P06400 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.9■□□□□ 0.62
RB1P06400 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RB1P06400 NCF1C-201ENST00000438382 1427 ntBASIC18.9■□□□□ 0.62
RB1P06400 ELL2P1-201ENST00000413990 1906 ntBASIC18.9■□□□□ 0.62
RB1P06400 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
RB1P06400 AC006504.4-201ENST00000592118 1568 ntBASIC18.89■□□□□ 0.62
RB1P06400 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RB1P06400 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
RB1P06400 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 ELK2BP-201ENST00000415014 1224 ntBASIC18.89■□□□□ 0.61
RB1P06400 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RB1P06400 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.89■□□□□ 0.61
RB1P06400 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.89■□□□□ 0.61
RB1P06400 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.89■□□□□ 0.61
RB1P06400 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.89■□□□□ 0.61
RB1P06400 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.89■□□□□ 0.61
RB1P06400 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 AL353593.2-201ENST00000602529 1483 ntBASIC18.89■□□□□ 0.61
RB1P06400 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RB1P06400 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.89■□□□□ 0.61
RB1P06400 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RB1P06400 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RB1P06400 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.88■□□□□ 0.61
RB1P06400 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.88■□□□□ 0.61
RB1P06400 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.88■□□□□ 0.61
RB1P06400 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.88■□□□□ 0.61
RB1P06400 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.88■□□□□ 0.61
RB1P06400 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.88■□□□□ 0.61
RB1P06400 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.88■□□□□ 0.61
RB1P06400 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.88■□□□□ 0.61
RB1P06400 AC092364.2-202ENST00000597012 1073 ntBASIC18.88■□□□□ 0.61
RB1P06400 AL513190.1-201ENST00000621254 727 ntBASIC18.88■□□□□ 0.61
RB1P06400 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.88■□□□□ 0.61
RB1P06400 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.88■□□□□ 0.61
RB1P06400 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RB1P06400 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.88■□□□□ 0.61
RB1P06400 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.88■□□□□ 0.61
RB1P06400 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.88■□□□□ 0.61
RB1P06400 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RB1P06400 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RB1P06400 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RB1P06400 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RB1P06400 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RB1P06400 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.87■□□□□ 0.61
RB1P06400 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.87■□□□□ 0.61
RB1P06400 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.87■□□□□ 0.61
RB1P06400 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RB1P06400 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.87■□□□□ 0.61
RB1P06400 RPS15P9-201ENST00000494093 319 ntBASIC18.87■□□□□ 0.61
RB1P06400 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.87■□□□□ 0.61
RB1P06400 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.87■□□□□ 0.61
RB1P06400 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.87■□□□□ 0.61
RB1P06400 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RB1P06400 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RB1P06400 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RB1P06400 CEND1P1-201ENST00000451006 455 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms