Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 AC132938.6-201ENST00000623828 1655 ntBASIC17.42■□□□□ 0.38
KRT6AP02538 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT6AP02538 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KRT6AP02538 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT6AP02538 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KRT6AP02538 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT6AP02538 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6AP02538 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT6AP02538 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT6AP02538 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT6AP02538 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6AP02538 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KRT6AP02538 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6AP02538 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT6AP02538 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT6AP02538 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KRT6AP02538 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
KRT6AP02538 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT6AP02538 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT6AP02538 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
KRT6AP02538 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT6AP02538 AC145285.6-201ENST00000604632 637 ntBASIC17.4■□□□□ 0.38
KRT6AP02538 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT6AP02538 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT6AP02538 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT6AP02538 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT6AP02538 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
KRT6AP02538 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT6AP02538 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
KRT6AP02538 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT6AP02538 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
KRT6AP02538 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT6AP02538 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT6AP02538 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KRT6AP02538 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6AP02538 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
KRT6AP02538 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT6AP02538 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT6AP02538 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6AP02538 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT6AP02538 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6AP02538 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6AP02538 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6AP02538 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms