Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 DUTP2-201ENST00000519164 463 ntBASIC16.24■□□□□ 0.19
PPP1R3DO95685 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 AC010947.1-201ENST00000623454 693 ntBASIC16.24■□□□□ 0.19
PPP1R3DO95685 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.24■□□□□ 0.19
PPP1R3DO95685 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PPP1R3DO95685 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 AC108860.2-201ENST00000562760 2183 ntBASIC16.23■□□□□ 0.19
PPP1R3DO95685 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.23■□□□□ 0.19
PPP1R3DO95685 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 NAPSB-206ENST00000562112 1266 ntBASIC16.23■□□□□ 0.19
PPP1R3DO95685 MIR4497-201ENST00000583208 89 ntBASIC16.23■□□□□ 0.19
PPP1R3DO95685 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPP1R3DO95685 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PPP1R3DO95685 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ECEL1P2-202ENST00000465689 757 ntBASIC16.22■□□□□ 0.19
PPP1R3DO95685 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PPP1R3DO95685 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms