Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 CICP6-201ENST00000457191 2729 ntBASIC14.01□□□□□ -0.17
ZNF253O75346 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 MCCD1P1-208ENST00000445732 328 ntBASIC14.01□□□□□ -0.17
ZNF253O75346 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.01□□□□□ -0.17
ZNF253O75346 KRT18P6-201ENST00000555540 1265 ntBASIC14.01□□□□□ -0.17
ZNF253O75346 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.01□□□□□ -0.17
ZNF253O75346 AP000692.2-201ENST00000608391 879 ntBASIC14.01□□□□□ -0.17
ZNF253O75346 AC092666.2-201ENST00000613287 246 ntBASIC14.01□□□□□ -0.17
ZNF253O75346 CR392000.1-201ENST00000624770 1228 ntBASIC14.01□□□□□ -0.17
ZNF253O75346 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ZNF253O75346 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF253O75346 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF253O75346 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF253O75346 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 AC096733.2-201ENST00000609937 1394 ntBASIC14□□□□□ -0.17
ZNF253O75346 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14□□□□□ -0.17
ZNF253O75346 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 B3GAT3P1-201ENST00000471720 806 ntBASIC14□□□□□ -0.17
ZNF253O75346 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14□□□□□ -0.17
ZNF253O75346 MNT-208ENST00000575394 606 ntTSL 4 BASIC14□□□□□ -0.17
ZNF253O75346 AF186192.3-201ENST00000583427 947 ntBASIC14□□□□□ -0.17
ZNF253O75346 AC073648.6-201ENST00000641589 218 ntBASIC14□□□□□ -0.17
ZNF253O75346 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ZNF253O75346 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ZNF253O75346 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ZNF253O75346 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ZNF253O75346 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ZNF253O75346 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF253O75346 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms