Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC24.76■■□□□ 1.55
BRD4O60885 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC24.76■■□□□ 1.55
BRD4O60885 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.76■■□□□ 1.55
BRD4O60885 AC139530.3-201ENST00000620344 690 ntBASIC24.76■■□□□ 1.55
BRD4O60885 PHGDH-209ENST00000641074 1780 ntBASIC24.76■■□□□ 1.55
BRD4O60885 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
BRD4O60885 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.75■■□□□ 1.55
BRD4O60885 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 AC099343.3-201ENST00000605834 2503 ntBASIC24.75■■□□□ 1.55
BRD4O60885 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
BRD4O60885 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.75■■□□□ 1.55
BRD4O60885 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.75■■□□□ 1.55
BRD4O60885 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.75■■□□□ 1.55
BRD4O60885 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 RPL18-209ENST00000550645 463 ntTSL 5 BASIC24.75■■□□□ 1.55
BRD4O60885 RPL18-214ENST00000552588 559 ntTSL 3 BASIC24.75■■□□□ 1.55
BRD4O60885 AC145285.3-201ENST00000564603 959 ntBASIC24.75■■□□□ 1.55
BRD4O60885 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.75■■□□□ 1.55
BRD4O60885 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BRD4O60885 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
BRD4O60885 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
BRD4O60885 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
BRD4O60885 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
BRD4O60885 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.74■■□□□ 1.55
BRD4O60885 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC24.74■■□□□ 1.55
BRD4O60885 MTDHP3-201ENST00000594186 672 ntBASIC24.74■■□□□ 1.55
BRD4O60885 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
BRD4O60885 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
BRD4O60885 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
BRD4O60885 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
BRD4O60885 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC24.74■■□□□ 1.55
BRD4O60885 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
BRD4O60885 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
BRD4O60885 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.74■■□□□ 1.55
BRD4O60885 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
BRD4O60885 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
BRD4O60885 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.73■■□□□ 1.55
BRD4O60885 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
BRD4O60885 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRD4O60885 NOC2LP2-201ENST00000407594 1944 ntBASIC24.73■■□□□ 1.55
BRD4O60885 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRD4O60885 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
BRD4O60885 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.73■■□□□ 1.55
BRD4O60885 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC24.73■■□□□ 1.55
BRD4O60885 LINC01126-201ENST00000623515 1646 ntBASIC24.73■■□□□ 1.55
BRD4O60885 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRD4O60885 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRD4O60885 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC24.73■■□□□ 1.55
BRD4O60885 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC24.73■■□□□ 1.55
BRD4O60885 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.73■■□□□ 1.55
BRD4O60885 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
BRD4O60885 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRD4O60885 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 AP005117.1-201ENST00000584346 1413 ntBASIC24.72■■□□□ 1.55
BRD4O60885 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 RPS2P28-201ENST00000314255 741 ntBASIC24.72■■□□□ 1.55
BRD4O60885 ABCD1P5-201ENST00000445663 754 ntBASIC24.72■■□□□ 1.55
BRD4O60885 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC24.72■■□□□ 1.55
BRD4O60885 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.72■■□□□ 1.55
BRD4O60885 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.72■■□□□ 1.55
BRD4O60885 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.72■■□□□ 1.55
BRD4O60885 AL049840.3-201ENST00000602669 611 ntBASIC24.72■■□□□ 1.55
BRD4O60885 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.72■■□□□ 1.55
BRD4O60885 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC24.72■■□□□ 1.55
BRD4O60885 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC24.72■■□□□ 1.55
BRD4O60885 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 AL096828.2-201ENST00000567259 1965 ntBASIC24.72■■□□□ 1.55
BRD4O60885 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
BRD4O60885 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 HNRNPDP1-201ENST00000439535 754 ntBASIC24.71■■□□□ 1.55
BRD4O60885 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC24.71■■□□□ 1.55
BRD4O60885 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
BRD4O60885 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.71■■□□□ 1.55
BRD4O60885 AC093010.1-201ENST00000473625 1624 ntBASIC24.71■■□□□ 1.55
BRD4O60885 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms