Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
GDF9O60383 AC005082.1-201ENST00000413042 2259 ntBASIC17.39■□□□□ 0.37
GDF9O60383 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 GK-202ENST00000378941 458 ntTSL 3 BASIC17.39■□□□□ 0.37
GDF9O60383 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.39■□□□□ 0.37
GDF9O60383 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.39■□□□□ 0.37
GDF9O60383 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.39■□□□□ 0.37
GDF9O60383 FAM58CP-201ENST00000435741 640 ntBASIC17.39■□□□□ 0.37
GDF9O60383 PDPK2P-202ENST00000562415 1191 ntBASIC17.39■□□□□ 0.37
GDF9O60383 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.39■□□□□ 0.37
GDF9O60383 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.39■□□□□ 0.37
GDF9O60383 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 AC004706.3-202ENST00000621574 984 ntBASIC17.39■□□□□ 0.37
GDF9O60383 AC004877.2-201ENST00000623941 599 ntBASIC17.39■□□□□ 0.37
GDF9O60383 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GDF9O60383 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDF9O60383 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.38■□□□□ 0.37
GDF9O60383 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 MRPL20P1-201ENST00000400819 433 ntBASIC17.38■□□□□ 0.37
GDF9O60383 IGLL3P-201ENST00000412472 434 ntBASIC17.38■□□□□ 0.37
GDF9O60383 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.38■□□□□ 0.37
GDF9O60383 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
GDF9O60383 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.38■□□□□ 0.37
GDF9O60383 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF9O60383 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.38■□□□□ 0.37
GDF9O60383 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
GDF9O60383 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GDF9O60383 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF9O60383 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 SPDYE21P-201ENST00000413323 827 ntBASIC17.37■□□□□ 0.37
GDF9O60383 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.37■□□□□ 0.37
GDF9O60383 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
GDF9O60383 AC109322.1-201ENST00000524499 1264 ntBASIC17.37■□□□□ 0.37
GDF9O60383 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF9O60383 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
GDF9O60383 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF9O60383 AC004835.2-201ENST00000603762 682 ntBASIC17.37■□□□□ 0.37
GDF9O60383 AL589182.2-201ENST00000619332 1049 ntBASIC17.37■□□□□ 0.37
GDF9O60383 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
GDF9O60383 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF9O60383 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF9O60383 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GDF9O60383 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF9O60383 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 LINC01126-201ENST00000623515 1646 ntBASIC17.36■□□□□ 0.37
GDF9O60383 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.36■□□□□ 0.37
GDF9O60383 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms