Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 PKD1P1-201ENST00000458669 6805 ntBASIC17.16■□□□□ 0.34
PCDH7O60245 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PCDH7O60245 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 AC005521.1-201ENST00000393351 872 ntBASIC17.16■□□□□ 0.34
PCDH7O60245 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDH7O60245 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 KRT89P-201ENST00000620027 1478 ntBASIC17.16■□□□□ 0.34
PCDH7O60245 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDH7O60245 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDH7O60245 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH7O60245 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 AC073508.3-201ENST00000619697 1419 ntBASIC17.15■□□□□ 0.34
PCDH7O60245 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH7O60245 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 STARP1-201ENST00000397973 869 ntBASIC17.15■□□□□ 0.34
PCDH7O60245 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDH7O60245 AC117947.1-201ENST00000427448 529 ntBASIC17.15■□□□□ 0.34
PCDH7O60245 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 KRT18P57-201ENST00000443599 1254 ntBASIC17.15■□□□□ 0.34
PCDH7O60245 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH7O60245 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH7O60245 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
PCDH7O60245 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH7O60245 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
PCDH7O60245 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH7O60245 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PCDH7O60245 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH7O60245 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH7O60245 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDH7O60245 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH7O60245 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH7O60245 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH7O60245 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 AC211429.1-201ENST00000415277 523 ntBASIC17.14■□□□□ 0.33
PCDH7O60245 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH7O60245 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH7O60245 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH7O60245 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH7O60245 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH7O60245 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH7O60245 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH7O60245 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH7O60245 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDH7O60245 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH7O60245 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms