Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 AC104819.1-201ENST00000504587 486 ntBASIC17.22■□□□□ 0.35
PRICKLE3O43900 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 MIR3652-201ENST00000579335 131 ntBASIC17.21■□□□□ 0.35
PRICKLE3O43900 BNIP3P18-201ENST00000593976 575 ntBASIC17.21■□□□□ 0.35
PRICKLE3O43900 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.21■□□□□ 0.35
PRICKLE3O43900 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRICKLE3O43900 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.21■□□□□ 0.34
PRICKLE3O43900 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.21■□□□□ 0.34
PRICKLE3O43900 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRICKLE3O43900 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PRICKLE3O43900 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
PRICKLE3O43900 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PRICKLE3O43900 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 CLEC4GP1-201ENST00000596555 870 ntBASIC17.2■□□□□ 0.34
PRICKLE3O43900 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 AC020763.4-201ENST00000623414 4170 ntBASIC17.2■□□□□ 0.34
PRICKLE3O43900 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.2■□□□□ 0.34
PRICKLE3O43900 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRICKLE3O43900 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.19■□□□□ 0.34
PRICKLE3O43900 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRICKLE3O43900 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms