Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.63■□□□□ 0.57
MSI1O43347 KRT126P-201ENST00000549467 1181 ntBASIC18.63■□□□□ 0.57
MSI1O43347 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.63■□□□□ 0.57
MSI1O43347 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.63■□□□□ 0.57
MSI1O43347 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
MSI1O43347 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSI1O43347 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
MSI1O43347 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
MSI1O43347 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.61■□□□□ 0.57
MSI1O43347 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 AL450487.1-201ENST00000426799 995 ntBASIC18.61■□□□□ 0.57
MSI1O43347 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.61■□□□□ 0.57
MSI1O43347 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.61■□□□□ 0.57
MSI1O43347 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.61■□□□□ 0.57
MSI1O43347 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.61■□□□□ 0.57
MSI1O43347 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.61■□□□□ 0.57
MSI1O43347 AL138831.2-201ENST00000606564 490 ntBASIC18.61■□□□□ 0.57
MSI1O43347 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MSI1O43347 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.61■□□□□ 0.57
MSI1O43347 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MSI1O43347 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
MSI1O43347 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 AC125634.1-201ENST00000438758 1403 ntBASIC18.6■□□□□ 0.57
MSI1O43347 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
MSI1O43347 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
MSI1O43347 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 UNC93B7-201ENST00000509439 705 ntBASIC18.6■□□□□ 0.57
MSI1O43347 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.6■□□□□ 0.57
MSI1O43347 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MSI1O43347 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms