Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.31■□□□□ 0.68
TNRC18O15417 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.31■□□□□ 0.68
TNRC18O15417 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 AC241585.1-201ENST00000433527 519 ntBASIC19.31■□□□□ 0.68
TNRC18O15417 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TNRC18O15417 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.31■□□□□ 0.68
TNRC18O15417 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.31■□□□□ 0.68
TNRC18O15417 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.31■□□□□ 0.68
TNRC18O15417 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.31■□□□□ 0.68
TNRC18O15417 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNRC18O15417 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.3■□□□□ 0.68
TNRC18O15417 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.3■□□□□ 0.68
TNRC18O15417 KRT18P65-201ENST00000439811 1286 ntBASIC19.3■□□□□ 0.68
TNRC18O15417 AC026150.2-201ENST00000564693 1156 ntBASIC19.3■□□□□ 0.68
TNRC18O15417 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.3■□□□□ 0.68
TNRC18O15417 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.3■□□□□ 0.68
TNRC18O15417 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.3■□□□□ 0.68
TNRC18O15417 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.3■□□□□ 0.68
TNRC18O15417 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.3■□□□□ 0.68
TNRC18O15417 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.3■□□□□ 0.68
TNRC18O15417 AC140658.5-201ENST00000438532 169 ntBASIC19.3■□□□□ 0.68
TNRC18O15417 FAM86C2P-203ENST00000528684 1004 ntBASIC19.3■□□□□ 0.68
TNRC18O15417 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
TNRC18O15417 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.3■□□□□ 0.68
TNRC18O15417 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.3■□□□□ 0.68
TNRC18O15417 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNRC18O15417 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TNRC18O15417 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 FXNP2-201ENST00000411625 547 ntBASIC19.29■□□□□ 0.68
TNRC18O15417 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.29■□□□□ 0.68
TNRC18O15417 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.29■□□□□ 0.68
TNRC18O15417 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.29■□□□□ 0.68
TNRC18O15417 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.29■□□□□ 0.68
TNRC18O15417 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.29■□□□□ 0.68
TNRC18O15417 ANKRD19P-201ENST00000338192 862 ntBASIC19.29■□□□□ 0.68
TNRC18O15417 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.29■□□□□ 0.68
TNRC18O15417 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNRC18O15417 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.29■□□□□ 0.68
TNRC18O15417 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
TNRC18O15417 FEM1AP3-201ENST00000403722 1741 ntBASIC19.29■□□□□ 0.68
TNRC18O15417 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TNRC18O15417 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNRC18O15417 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TNRC18O15417 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNRC18O15417 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.28■□□□□ 0.68
TNRC18O15417 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.28■□□□□ 0.68
TNRC18O15417 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.28■□□□□ 0.68
TNRC18O15417 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TNRC18O15417 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.28■□□□□ 0.68
TNRC18O15417 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.28■□□□□ 0.68
TNRC18O15417 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNRC18O15417 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.28■□□□□ 0.68
TNRC18O15417 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.28■□□□□ 0.68
TNRC18O15417 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms