Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXN1O15353 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXN1O15353 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXN1O15353 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.4■■□□□ 1.02
FOXN1O15353 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXN1O15353 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXN1O15353 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXN1O15353 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXN1O15353 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
FOXN1O15353 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXN1O15353 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.39■■□□□ 1.02
FOXN1O15353 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.39■■□□□ 1.02
FOXN1O15353 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.39■■□□□ 1.02
FOXN1O15353 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXN1O15353 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXN1O15353 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
FOXN1O15353 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXN1O15353 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.39■■□□□ 1.01
FOXN1O15353 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXN1O15353 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.39■■□□□ 1.01
FOXN1O15353 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
FOXN1O15353 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.39■■□□□ 1.01
FOXN1O15353 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXN1O15353 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXN1O15353 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.39■■□□□ 1.01
FOXN1O15353 AC024563.2-201ENST00000603282 481 ntBASIC21.39■■□□□ 1.01
FOXN1O15353 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXN1O15353 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXN1O15353 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXN1O15353 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXN1O15353 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXN1O15353 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXN1O15353 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
FOXN1O15353 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
FOXN1O15353 AC009947.1-201ENST00000444350 727 ntBASIC21.38■■□□□ 1.01
FOXN1O15353 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.38■■□□□ 1.01
FOXN1O15353 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXN1O15353 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.38■■□□□ 1.01
FOXN1O15353 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXN1O15353 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXN1O15353 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXN1O15353 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 AP002414.3-201ENST00000589352 1468 ntBASIC21.38■■□□□ 1.01
FOXN1O15353 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXN1O15353 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXN1O15353 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.37■■□□□ 1.01
FOXN1O15353 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
FOXN1O15353 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXN1O15353 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.37■■□□□ 1.01
FOXN1O15353 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.37■■□□□ 1.01
FOXN1O15353 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.37■■□□□ 1.01
FOXN1O15353 AC105339.3-201ENST00000560043 636 ntBASIC21.37■■□□□ 1.01
FOXN1O15353 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.37■■□□□ 1.01
FOXN1O15353 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 AC025062.2-201ENST00000605477 670 ntBASIC21.37■■□□□ 1.01
FOXN1O15353 AC093512.1-201ENST00000617969 520 ntBASIC21.37■■□□□ 1.01
FOXN1O15353 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXN1O15353 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.37■■□□□ 1.01
FOXN1O15353 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXN1O15353 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 AC005082.1-201ENST00000413042 2259 ntBASIC21.36■■□□□ 1.01
FOXN1O15353 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms