Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD9O15198 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AP000997.3-201ENST00000623333 2250 ntBASIC16.31■□□□□ 0.2
SMAD9O15198 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMAD9O15198 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SMAD9O15198 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AC005332.1-201ENST00000577698 1310 ntBASIC16.31■□□□□ 0.2
SMAD9O15198 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AL645929.1-201ENST00000420084 975 ntBASIC16.31■□□□□ 0.2
SMAD9O15198 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD9O15198 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD9O15198 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD9O15198 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD9O15198 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD9O15198 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD9O15198 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD9O15198 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD9O15198 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SMAD9O15198 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD9O15198 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMAD9O15198 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SMAD9O15198 AL162741.1-201ENST00000565563 1558 ntBASIC16.3■□□□□ 0.2
SMAD9O15198 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SMAD9O15198 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SMAD9O15198 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD9O15198 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD9O15198 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD9O15198 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.3■□□□□ 0.2
SMAD9O15198 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMAD9O15198 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD9O15198 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD9O15198 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SMAD9O15198 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SMAD9O15198 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 KRT18P48-201ENST00000434763 852 ntBASIC16.29■□□□□ 0.2
SMAD9O15198 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.29■□□□□ 0.2
SMAD9O15198 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.29■□□□□ 0.2
SMAD9O15198 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms