Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
AP3B1O00203 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3B1O00203 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP3B1O00203 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 DDX43P3-201ENST00000441064 443 ntBASIC18.15■□□□□ 0.5
AP3B1O00203 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 AC010203.1-204ENST00000548782 407 ntBASIC18.15■□□□□ 0.5
AP3B1O00203 AC012306.2-201ENST00000609350 630 ntBASIC18.15■□□□□ 0.5
AP3B1O00203 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3B1O00203 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3B1O00203 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP3B1O00203 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3B1O00203 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3B1O00203 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3B1O00203 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.14■□□□□ 0.5
AP3B1O00203 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
AP3B1O00203 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
AP3B1O00203 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
AP3B1O00203 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.14■□□□□ 0.49
AP3B1O00203 HLA-F-220ENST00000434407 884 ntBASIC18.14■□□□□ 0.49
AP3B1O00203 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.14■□□□□ 0.49
AP3B1O00203 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.14■□□□□ 0.49
AP3B1O00203 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.14■□□□□ 0.49
AP3B1O00203 AC009154.2-201ENST00000621177 724 ntBASIC18.14■□□□□ 0.49
AP3B1O00203 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 AC133561.5-201ENST00000635547 218 ntBASIC18.14■□□□□ 0.49
AP3B1O00203 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.14■□□□□ 0.49
AP3B1O00203 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3B1O00203 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3B1O00203 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.14■□□□□ 0.49
AP3B1O00203 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3B1O00203 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 AC133963.1-201ENST00000504166 1679 ntBASIC18.13■□□□□ 0.49
AP3B1O00203 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 HOMER2P1-201ENST00000455653 964 ntBASIC18.13■□□□□ 0.49
AP3B1O00203 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.13■□□□□ 0.49
AP3B1O00203 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.13■□□□□ 0.49
AP3B1O00203 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 AL441883.1-201ENST00000566170 1045 ntBASIC18.13■□□□□ 0.49
AP3B1O00203 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
AP3B1O00203 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AP3B1O00203 LINC01451-201ENST00000623792 534 ntBASIC18.13■□□□□ 0.49
AP3B1O00203 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.13■□□□□ 0.49
AP3B1O00203 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.13■□□□□ 0.49
AP3B1O00203 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.13■□□□□ 0.49
AP3B1O00203 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3B1O00203 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3B1O00203 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms