Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
SRRM3A6NNA2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.61■□□□□ 0.57
SRRM3A6NNA2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 CCR12P-201ENST00000446203 998 ntBASIC18.61■□□□□ 0.57
SRRM3A6NNA2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 AL445675.2-201ENST00000620291 557 ntBASIC18.61■□□□□ 0.57
SRRM3A6NNA2 AC139530.3-201ENST00000620344 690 ntBASIC18.61■□□□□ 0.57
SRRM3A6NNA2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SRRM3A6NNA2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 MIR3652-201ENST00000579335 131 ntBASIC18.6■□□□□ 0.57
SRRM3A6NNA2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SRRM3A6NNA2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AC140113.3-201ENST00000605663 199 ntBASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AC010653.2-201ENST00000623505 997 ntBASIC18.59■□□□□ 0.57
SRRM3A6NNA2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
SRRM3A6NNA2 AC068587.9-201ENST00000641814 219 ntBASIC18.59■□□□□ 0.57
SRRM3A6NNA2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms