Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.76■□□□□ 0.91
SSC5DA1L4H1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSC5DA1L4H1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 MRPL20P1-201ENST00000400819 433 ntBASIC20.75■□□□□ 0.91
SSC5DA1L4H1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 AP000344.2-201ENST00000512987 629 ntBASIC20.75■□□□□ 0.91
SSC5DA1L4H1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 AC004877.2-201ENST00000623941 599 ntBASIC20.75■□□□□ 0.91
SSC5DA1L4H1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSC5DA1L4H1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 MIR770-201ENST00000390219 98 ntBASIC20.74■□□□□ 0.91
SSC5DA1L4H1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 RHOQP3-201ENST00000437982 621 ntBASIC20.74■□□□□ 0.91
SSC5DA1L4H1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 DUTP2-201ENST00000519164 463 ntBASIC20.74■□□□□ 0.91
SSC5DA1L4H1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SSC5DA1L4H1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 FAM58CP-201ENST00000435741 640 ntBASIC20.73■□□□□ 0.91
SSC5DA1L4H1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 BCAR1-209ENST00000546196 1340 ntBASIC20.73■□□□□ 0.91
SSC5DA1L4H1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSC5DA1L4H1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms