Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 FLJ13224-201ENST00000313737 1514 ntBASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC034236.2-201ENST00000606662 1610 ntBASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AP000593.1-201ENST00000393668 712 ntBASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC104390.1-201ENST00000555663 520 ntBASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC011498.5-201ENST00000592027 486 ntBASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC010240.3-201ENST00000607688 395 ntBASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AL121672.3-201ENST00000608644 468 ntBASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 HOXB1-202ENST00000577092 1414 ntBASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SPDYE13P-201ENST00000445314 798 ntBASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 LINC00896-202ENST00000609602 2128 ntBASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AL391807.1-203ENST00000604392 2365 ntBASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms