Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV5-3A0A0A0MS03 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 KRT89P-201ENST00000620027 1478 ntBASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 TSPY15P-201ENST00000457163 923 ntBASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 HMGA1P5-201ENST00000412453 271 ntBASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 SNORA78-201ENST00000459373 127 ntBASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV5-3A0A0A0MS03 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 KRT17P2-201ENST00000300992 1314 ntBASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms