Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1G3Q9Y6M4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 AC099343.3-201ENST00000605834 2503 ntBASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 GPALPP1-207ENST00000611650 899 ntBASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 CROCCP3-202ENST00000420820 1947 ntBASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1G3Q9Y6M4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 MIR574-201ENST00000385209 96 ntBASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 AC139887.3-201ENST00000568585 713 ntBASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 AL671883.3-201ENST00000603274 991 ntBASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 ANO7L1-203ENST00000602586 1720 ntBASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.54■□□□□ 0.4
CSNK1G3Q9Y6M4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 AC097374.2-201ENST00000618617 1306 ntBASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms