Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 MIR1238-201ENST00000408483 83 ntBASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 MYC-208ENST00000641036 567 ntBASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 AC096733.2-201ENST00000609937 1394 ntBASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 TSPY21P-201ENST00000433481 731 ntBASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 PRSS44-201ENST00000515154 1146 ntBASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4B1Q9Y6B7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 CRYGFP-201ENST00000418459 633 ntBASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP4B1Q9Y6B7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms