Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 AC113404.2-201ENST00000507884 177 ntBASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 RNF126P1-202ENST00000569893 925 ntBASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 AL391807.1-203ENST00000604392 2365 ntBASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 MIR662-201ENST00000384847 95 ntBASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 AC104692.2-201ENST00000603054 253 ntBASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 AC024563.2-201ENST00000603282 481 ntBASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB1Q9Y5F3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AL022342.1-201ENST00000400363 863 ntBASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 FOSL1P1-201ENST00000511041 816 ntBASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 DUTP2-201ENST00000519164 463 ntBASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC091304.2-201ENST00000564639 760 ntBASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms