Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB7Q9Y5E2 PMPCAP1-201ENST00000508114 1576 ntBASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 AC010460.3-201ENST00000511359 1579 ntBASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 AC022898.2-201ENST00000616822 1312 ntBASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 UNC93B6-202ENST00000528242 690 ntBASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB7Q9Y5E2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB7Q9Y5E2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB7Q9Y5E2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB7Q9Y5E2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PCDHB7Q9Y5E2 AL031598.1-201ENST00000561511 1773 ntBASIC19.27■□□□□ 0.67
PCDHB7Q9Y5E2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 AC005104.2-201ENST00000427818 678 ntBASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 AC103564.2-201ENST00000432853 1299 ntBASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB7Q9Y5E2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 MIR1199-201ENST00000621445 119 ntBASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 AD001527.2-201ENST00000622994 785 ntBASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB7Q9Y5E2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 PHGDH-209ENST00000641074 1780 ntBASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 AC092183.1-201ENST00000469884 875 ntBASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB7Q9Y5E2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms