Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX4Q9UBX2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX4Q9UBX2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.8■□□□□ 0.12
DUX4Q9UBX2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 LINC00896-202ENST00000609602 2128 ntBASIC15.8■□□□□ 0.12
DUX4Q9UBX2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
DUX4Q9UBX2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX4Q9UBX2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX4Q9UBX2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms