Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 TSPY22P-201ENST00000427496 604 ntBASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 BX276092.5-203ENST00000456199 560 ntBASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 AL358472.4-201ENST00000633140 710 ntBASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 AL353692.3-201ENST00000407031 1396 ntBASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PARPBPQ9NWS1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.08■□□□□ 0.17
PARPBPQ9NWS1 Z83836.1-201ENST00000624605 1642 ntBASIC16.08■□□□□ 0.17
PARPBPQ9NWS1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PARPBPQ9NWS1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PARPBPQ9NWS1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PARPBPQ9NWS1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PARPBPQ9NWS1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 GUSBP12-201ENST00000513727 720 ntBASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 KRT8P26-201ENST00000534154 1276 ntBASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 AL121672.3-201ENST00000608644 468 ntBASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PARPBPQ9NWS1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 TSPY12P-201ENST00000421279 868 ntBASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC090616.6-201ENST00000582640 721 ntBASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AL390719.2-201ENST00000606993 987 ntBASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms